STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epm2aEPM2A glucan phosphatase, laforin. (317 aa)    
Predicted Functional Partners:
ENSCHAP00000021376
annotation not available
    
 0.948
ENSCHAP00000030241
annotation not available
    
 
 0.834
ENSCHAP00000000456
annotation not available
     
 0.690
ENSCHAP00000025941
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.629
ENSCHAP00000062817
NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae).
    
 
 0.604
ENSCHAP00000039433
Inositol polyphosphate phosphatase-like 1b.
   
 
 0.599
ENSCHAP00000041671
annotation not available
    
  0.597
ENSCHAP00000051208
annotation not available
    
  0.597
gys1
Glycogen synthase 1.
    
 0.590
ENSCHAP00000056602
Glycogen synthase 2.
    
 0.590
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.