STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105911024Adenine phosphoribosyltransferase 1-like. (339 aa)    
Predicted Functional Partners:
hsd17b7
Hydroxysteroid 17-beta dehydrogenase 7.
     
 0.925
ENSCHAP00000002668
Retinol dehydrogenase 1.
   
 
0.886
LOC105906694
Very-long-chain 3-oxoacyl-CoA reductase-like.
 
 
0.880
LOC105908006
Retinol dehydrogenase 3-like.
  
 
0.873
ENSCHAP00000024099
Hydroxysteroid (17-beta) dehydrogenase 8.
  
  
0.865
ENSCHAP00000031673
Hydroxysteroid (17-beta) dehydrogenase 12a.
 
 
0.857
pdxp
Pyridoxal phosphatase.
    
 0.849
pgp
Phosphoglycolate phosphatase.
    
 0.849
ENSCHAP00000061794
Hydroxysteroid (17-beta) dehydrogenase 12b.
   
0.847
LOC105897256
D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like.
  
 
 0.846
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.