STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000036714Si:ch1073-280e3.1. (836 aa)    
Predicted Functional Partners:
ENSCHAP00000039421
Complement component 5.
   
 0.806
ENSCHAP00000059097
Complement component 1, q subcomponent, A chain.
   
 0.785
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
    
  0.752
ENSCHAP00000041906
Macrophage stimulating 1 receptor a.
    
  0.752
ENSCHAP00000053649
MET proto-oncogene, receptor tyrosine kinase.
    
  0.752
ENSCHAP00000028237
annotation not available
   
 0.733
serping1
Serpin family G member 1.
  
 0.712
ENSCHAP00000004449
Complement 4B (Chido blood group).
   
 0.709
LOC105909320
Complement C4-like.
   
 0.709
ENSCHAP00000004204
annotation not available
   
 0.707
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.