STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105891795Aquaporin-10-like. (309 aa)    
Predicted Functional Partners:
ENSCHAP00000048431
Protein phosphatase 1, regulatory subunit 21.
    
   0.785
wtap
WT1 associated protein.
    
   0.785
ENSCHAP00000059480
Exosome component 8.
    
   0.785
ENSCHAP00000011314
Katanin p60 subunit A-like 2.
  
 0.731
ENSCHAP00000002175
annotation not available
  
 
 0.718
gk
Glycerol kinase.
  
 
 0.718
gk5
Glycerol kinase 5.
  
 
 0.713
LOC105891357
FGGY carbohydrate kinase domain-containing protein-like.
  
 
 0.713
ENSCHAP00000042603
annotation not available
  
 
 0.713
ENSCHAP00000005557
annotation not available
  
 
 0.687
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.