STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtfr1lMitochondrial fission regulator 1 like. (304 aa)    
Predicted Functional Partners:
armc1
Armadillo repeat containing 1.
    
 
 0.654
LOC105894677
Armadillo repeat-containing protein 1-like.
    
 
 0.642
LOC105909901
Cleavage stimulation factor subunit 1.
      
 0.539
ENSCHAP00000024660
VPS33A core subunit of CORVET and HOPS complexes.
      
 0.526
ENSCHAP00000039893
TatD DNase domain containing 2.
      
 0.526
ENSCHAP00000062696
Solute carrier family 12 member 8.
      
 0.523
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
      
 0.435
rftn2
Raftlin family member 2.
  
     0.409
ENSCHAP00000004724
Pirin.
      
 0.408
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.