STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
isoc2Isochorismatase domain containing 2. (204 aa)    
Predicted Functional Partners:
ENSCHAP00000016121
Nicotinate phosphoribosyltransferase.
  
 
 0.941
ENSCHAP00000061642
5-oxoprolinase, ATP-hydrolysing.
    
  0.845
QPRT
Quinolinate phosphoribosyltransferase.
   
 0.837
ephx2
Epoxide hydrolase 2.
  
 0.801
rbp1
Retinol binding protein 1.
    
 0.789
ENSCHAP00000028508
Nicotinamide nucleotide adenylyltransferase 1.
    
 0.789
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
    
 0.789
LOC105907731
Ribonuclease UK114-like.
  
 
 0.788
RIDA
Reactive intermediate imine deaminase A homolog.
  
 
 0.788
LOC105895195
Inosine-uridine preferring nucleoside hydrolase-like.
    
 0.778
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.