STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000037085DNA-damage-inducible transcript 3. (299 aa)    
Predicted Functional Partners:
cebpb
CCAAT enhancer binding protein beta.
    
 0.989
ENSCHAP00000056547
Activating transcription factor 4a.
   
 0.978
ENSCHAP00000007558
annotation not available
   
 0.973
ENSCHAP00000008696
annotation not available
   
 0.973
cebpa
CCAAT enhancer binding protein alpha.
    
 0.956
ENSCHAP00000043611
Activating transcription factor 4b.
   
 0.951
ENSCHAP00000012328
annotation not available
   
 0.911
ENSCHAP00000017538
Activating transcription factor 6.
   
 0.911
ENSCHAP00000058915
Nuclear factor, erythroid 2-like 2a.
   
 0.903
LOC105891347
Apoptosis regulator Bcl-2-like.
   
 
 0.891
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.