STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000037087annotation not available (522 aa)    
Predicted Functional Partners:
ENSCHAP00000000941
DEK proto-oncogene.
    
 0.683
ENSCHAP00000025613
annotation not available
    
 0.585
kctd8
Potassium channel tetramerization domain containing 8.
    
 0.560
KCTD15
Potassium channel tetramerization domain containing 15.
    
 0.560
ENSCHAP00000010590
Potassium channel tetramerization domain containing 16b.
    
 0.560
ENSCHAP00000015085
annotation not available
    
0.560
ENSCHAP00000015104
Potassium channel tetramerization domain containing 1.
    
 0.560
ENSCHAP00000020226
Potassium channel tetramerization domain containing 6b.
    
 0.560
ENSCHAP00000028087
Potassium channel tetramerisation domain containing 12.2.
    
 0.560
KCTD11
Potassium channel tetramerization domain containing 11.
    
 0.560
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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