STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000037279Myosin IEb. (1089 aa)    
Predicted Functional Partners:
elp4
Elongator acetyltransferase complex subunit 4.
   
 0.901
ENSCHAP00000054070
Elongator complex protein 1.
    
 0.899
elp3
Elongator acetyltransferase complex subunit 3.
    
 0.898
ENSCHAP00000031536
annotation not available
   
 0.885
ENSCHAP00000052929
WASP like actin nucleation promoting factor a.
   
 0.885
ENSCHAP00000054427
WASP actin nucleation promoting factor b.
   
 0.885
calm1
Calmodulin.
    
 0.816
ENSCHAP00000007904
annotation not available
    
 0.816
calm1-2
Calmodulin.
    
 0.816
calm1-3
Calmodulin.
    
 0.816
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.