STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpk1Thiamin pyrophosphokinase 1. (251 aa)    
Predicted Functional Partners:
ENSCHAP00000030664
Multiple inositol-polyphosphate phosphatase 1a.
     
 0.911
ppil6
Peptidylprolyl isomerase like 6.
     
 0.888
ENSCHAP00000003188
Adenylate kinase 5, like.
     
 0.876
ak1
Adenylate kinase 1.
     
 0.876
ak5
Adenylate kinase 5.
     
 0.876
ENSCHAP00000011057
Adenylate kinase 4.
     
 0.867
ak8
Adenylate kinase 8.
     
 0.867
ENSCHAP00000033630
Acid phosphatase 1.
    
  0.860
ENSCHAP00000062356
Acid phosphatase 7, tartrate resistant (putative).
    
  0.848
ENSCHAP00000022615
Adenylate kinase 7a.
     
 0.845
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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