STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000037373Heat shock protein 90, beta (grp94), member 1. (852 aa)    
Predicted Functional Partners:
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.997
ENSCHAP00000011930
Heat shock protein 5.
  
 0.995
hyou1
Hypoxia up-regulated 1.
  
 0.995
ENSCHAP00000012252
annotation not available
  
 0.994
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
  
 0.989
ENSCHAP00000004633
Calreticulin 3b.
   
 0.988
ENSCHAP00000007951
Prolyl 4-hydroxylase, beta polypeptide.
  
 0.988
ENSCHAP00000035341
Calreticulin.
   
 0.988
ENSCHAP00000058341
Ankyrin repeat domain 45.
  
 0.987
LOC105903135
Cysteine and histidine-rich domain-containing protein 1-like.
   
 0.981
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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