STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000037425Tumor protein p53 binding protein, 1. (1591 aa)    
Predicted Functional Partners:
ENSCHAP00000035355
ATM serine/threonine kinase.
    
 0.997
xrcc6
X-ray repair cross complementing 6.
    
 0.996
chek2
Checkpoint kinase 2.
    
 0.995
ENSCHAP00000038241
ATR serine/threonine kinase.
    
 0.995
ENSCHAP00000006565
annotation not available
    
 0.994
topbp1
DNA topoisomerase II binding protein 1.
    
 
 0.994
ENSCHAP00000010628
Polymerase (DNA directed), delta 1, catalytic subunit.
   
 0.989
ENSCHAP00000026444
PWWP domain containing 2A.
    
 0.987
ENSCHAP00000036254
Ring finger protein 168.
    
 0.985
ENSCHAP00000027876
Mediator of DNA damage checkpoint 1.
    
 0.983
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.