STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000037981annotation not available (132 aa)    
Predicted Functional Partners:
myl1
Myosin light chain 1.
   
 0.944
LOC105897346
Myosin light polypeptide 6.
   
 0.825
ENSCHAP00000001457
Troponin T2d, cardiac.
   
 0.815
smim20
Small integral membrane protein 20.
   
 0.815
ENSCHAP00000002275
Troponin T type 2a (cardiac).
   
 0.815
ENSCHAP00000005462
Troponin T type 2b (cardiac).
   
 0.815
TNNT3
Troponin T3, fast skeletal type.
   
 0.815
ENSCHAP00000035434
Troponin T type 3a (skeletal, fast).
   
 0.815
ENSCHAP00000039877
Troponin T type 1 (skeletal, slow).
   
 0.815
ENSCHAP00000041443
Troponin T2c, cardiac.
   
 0.815
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.