STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgi1Leucine rich glioma inactivated 1. (558 aa)    
Predicted Functional Partners:
ADAM11
ADAM metallopeptidase domain 11.
     
 0.665
ENSCHAP00000023165
ADAM metallopeptidase domain 22.
     
 0.665
adam23
ADAM metallopeptidase domain 23.
     
 0.597
ADAM23
ADAM metallopeptidase domain 23.
     
 0.597
ENSCHAP00000035745
annotation not available
  
    0.451
ENSCHAP00000000749
Neurexophilin 1.
  
    0.430
ENSCHAP00000049114
Neurexophilin 2b.
  
    0.413
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.