STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000038268Dystrobrevin binding protein 1b. (229 aa)    
Predicted Functional Partners:
snapin
SNAP associated protein.
   
 0.997
ENSCHAP00000061057
Biogenesis of lysosomal organelles complex-1, subunit 2.
    
 0.994
bloc1s5
Biogenesis of lysosomal organelles complex 1 subunit 5.
    
 0.993
ENSCHAP00000047052
Biogenesis of lysosomal organelles complex-1, subunit 3.
    
 0.990
LOC105910270
Biogenesis of lysosome-related organelles complex 1 subunit 4-like.
   
 0.988
hps5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
     
 0.963
ENSCHAP00000057899
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
     
 0.963
ENSCHAP00000025808
annotation not available
     
 0.961
hps4
HPS4 biogenesis of lysosomal organelles complex 3 subunit 2.
     
 0.956
ENSCHAP00000012269
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.937
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.