STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000038422annotation not available (356 aa)    
Predicted Functional Partners:
dynlt1
Dynein light chain Tctex-type 1.
    
 
 0.689
ENSCHAP00000031615
Dynein, light chain, roadblock-type 1.
    
 
 0.595
dnal4
Dynein axonemal light chain 4.
    
 
 0.567
LOC105898470
Dynein light chain 2, cytoplasmic-like.
    
 
 0.525
DYNLL2
Dynein light chain 2, cytoplasmic.
    
 
 0.525
dnai2
Dynein axonemal intermediate chain 2.
    
 
 0.519
ENSCHAP00000060746
Dynein, axonemal, intermediate chain 1, paralog 2.
    
 
 0.512
WDR63
WD repeat domain 63.
    
 
 0.502
ENSCHAP00000015252
WD repeat domain 78.
    
   0.489
ENSCHAP00000018606
WD repeat domain 60.
    
   0.489
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.