STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105908900Elongation of very long chain fatty acids protein 4-like. (313 aa)    
Predicted Functional Partners:
ENSCHAP00000061794
Hydroxysteroid (17-beta) dehydrogenase 12b.
   
 0.881
LOC105906694
Very-long-chain 3-oxoacyl-CoA reductase-like.
   
 0.880
ENSCHAP00000031673
Hydroxysteroid (17-beta) dehydrogenase 12a.
   
 0.880
ENSCHAP00000009170
annotation not available
    
 0.870
LOC105895074
Elongation of very long chain fatty acids protein 4-like.
  
  
 
0.852
LOC105904199
Elongation of very long chain fatty acids protein 4-like.
  
  
0.851
elovl1
ELOVL fatty acid elongase 1.
  
 
0.843
tecr
trans-2,3-enoyl-CoA reductase.
    
 0.834
ENSCHAP00000034941
trans-2,3-enoyl-CoA reductase-like 2b.
    
 0.834
fads2
Fatty acid desaturase 2.
     
 0.793
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.