STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000038621Myosin IXAa. (1452 aa)    
Predicted Functional Partners:
ENSCHAP00000020068
Myosin VIb.
    
0.928
ENSCHAP00000033918
Myosin VIa.
    
0.928
ENSCHAP00000007184
Lysine (K)-specific demethylase 6B, b.
    
  0.907
ENSCHAP00000032575
Lysine (K)-specific demethylase 6B, a.
    
  0.907
ENSCHAP00000047368
Lysine (K)-specific demethylase 6A.
    
  0.907
ENSCHAP00000015988
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.853
ENSCHAP00000021246
Translocase of outer mitochondrial membrane 20.
   
  0.852
ENSCHAP00000030862
AT rich interactive domain 4A (RBP1-like).
   
  0.852
ENSCHAP00000018026
annotation not available
    
 0.849
LOC105906845
Cell division control protein 42 homolog.
    
 0.849
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.