STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000038875Niban apoptosis regulator 1a. (1127 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.934
ENSCHAP00000021246
Translocase of outer mitochondrial membrane 20.
    
 0.927
ENSCHAP00000030862
AT rich interactive domain 4A (RBP1-like).
    
 0.927
dctn2
Dynactin subunit 2.
    
 0.828
ENSCHAP00000016490
Intersectin 2b.
     
 0.825
ENSCHAP00000057857
Intersectin 2a.
     
 0.825
ENSCHAP00000040099
Actin related protein 2/3 complex, subunit 4.
   
 0.819
ENSCHAP00000054960
Actin related protein 8.
    
 0.812
ruvbl1
RuvB like AAA ATPase 1.
    
 0.810
LOC105899917
Dynactin subunit 5.
    
 0.807
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.