STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galnt16Polypeptide N-acetylgalactosaminyltransferase 16. (570 aa)    
Predicted Functional Partners:
b3gnt3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3.
     
 0.880
ENSCHAP00000003887
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.877
ENSCHAP00000007468
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b.
     
 0.877
galnt7
Polypeptide N-acetylgalactosaminyltransferase 7.
  
  
0.789
ENSCHAP00000062695
Heart development protein with EGF-like domains 1.
    
 0.712
ENSCHAP00000039866
annotation not available
     
 0.638
nelfa
Negative elongation factor complex member A.
     
 0.638
LOC105894134
Polypeptide N-acetylgalactosaminyltransferase 6-like.
  
  
 
0.588
galnt6
Polypeptide N-acetylgalactosaminyltransferase 6.
  
  
 
0.585
GALNT3
Polypeptide N-acetylgalactosaminyltransferase 3.
  
  
 
0.585
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.