STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCN4ASodium voltage-gated channel alpha subunit 4. (1825 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.998
ENSCHAP00000047252
Sodium channel, voltage-gated, type II, beta.
   
 0.986
LOC105891920
Sodium channel subunit beta-1-like.
    
 0.980
scn1b
Sodium voltage-gated channel beta subunit 1.
    
 0.980
ENSCHAP00000026254
Sodium channel, voltage-gated, type III, beta.
    
 0.971
SCN4B
Sodium voltage-gated channel beta subunit 4.
    
 0.937
LOC105891950
Sodium channel subunit beta-1-like.
   
 
  0.926
ENSCHAP00000014161
Sodium channel, voltage-gated, type IV, alpha, a.
  
  
 
0.925
ENSCHAP00000009365
Sodium channel, voltage-gated, type I like, alpha b.
  
 
0.889
ENSCHAP00000013775
Sodium channel, voltage gated, type XII, alpha a.
  
 
0.889
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.