STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000039104annotation not available (308 aa)    
Predicted Functional Partners:
ENSCHAP00000054756
Rap guanine nucleotide exchange factor (GEF) 1a.
    
 0.957
abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase.
    
 0.955
abl2
ABL proto-oncogene 2, non-receptor tyrosine kinase.
    
 0.955
ENSCHAP00000024752
BCAR1 scaffold protein, Cas family member.
    
 0.954
dock1
Dedicator of cytokinesis 1.
    
 0.952
ENSCHAP00000061854
Rap guanine nucleotide exchange factor (GEF) 1b.
    
 0.943
gab1
GRB2 associated binding protein 1.
    
 0.923
ENSCHAP00000013531
annotation not available
    
 0.909
ENSCHAP00000035460
Paxillin b.
    
 0.909
LOC105892101
Growth factor receptor-bound protein 2.
    
0.897
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.