STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERHERH mRNA splicing and mitosis factor. (104 aa)    
Predicted Functional Partners:
snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
  0.965
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 
  0.963
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
  0.962
snrpg
Small nuclear ribonucleoprotein polypeptide G.
   
 
  0.954
ENSCHAP00000034993
Small nuclear ribonucleoprotein D1 polypeptide.
   
 
 0.933
SNRPD1
Small nuclear ribonucleoprotein Sm D1.
   
 
 0.933
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
  0.925
LOC105889118
Small nuclear ribonucleoprotein Sm D3-like.
   
  0.925
WDR77
WD repeat domain 77.
    
 0.859
prmt5
Protein arginine methyltransferase 5.
    
 0.859
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.