STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000039529Solute carrier family 4 member 4b. (1128 aa)    
Predicted Functional Partners:
dnali1
Dynein axonemal light intermediate chain 1.
   
  
 0.562
ENSCHAP00000045141
Solute carrier family 26 member 4.
     
 0.556
ENSCHAP00000034033
NPHS2 stomatin family member, podocin.
    
 0.540
LOC105907155
Cytochrome b5 domain-containing protein 1.
   
  
 0.529
TTC6
Tetratricopeptide repeat domain 6.
   
    0.522
ENSCHAP00000038322
Solute carrier family 26 member 6.
     
 0.509
mtr
5-methyltetrahydrofolate-homocysteine methyltransferase.
   
 
  0.485
ENSCHAP00000033549
Zeta chain of T cell receptor associated protein kinase 70.
    
  0.481
ENSCHAP00000042878
Spleen tyrosine kinase.
    
  0.481
lsm8
LSM8 homolog, U6 small nuclear RNA associated.
     
 0.479
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.