STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000039689annotation not available (242 aa)    
Predicted Functional Partners:
ENSCHAP00000047683
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.960
ENSCHAP00000024967
CD4-1 molecule.
  
 0.944
rps14
Ribosomal protein S14.
   
 0.931
ENSCHAP00000040785
annotation not available
    
  0.885
mrps11
Mitochondrial ribosomal protein S11.
   
 0.858
ENSCHAP00000051203
annotation not available
 
0.842
ENSCHAP00000039873
annotation not available
 
0.836
ENSCHAP00000003321
annotation not available
 
0.834
ENSCHAP00000003626
annotation not available
 
0.833
ENSCHAP00000011200
annotation not available
 
0.833
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.