STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000039726WSC domain containing 1b. (623 aa)    
Predicted Functional Partners:
ENSCHAP00000054339
annotation not available
   
 0.999
cenpx
Centromere protein X.
    
 0.921
ENSCHAP00000038682
Si:ch211-195p4.4.
   
 0.917
faap24
FA core complex associated protein 24.
    
 0.853
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.847
rpp30
Ribonuclease P/MRP subunit p30.
    
 0.846
pop4
POP4 homolog, ribonuclease P/MRP subunit.
   
 0.846
pop5
POP5 homolog, ribonuclease P/MRP subunit.
   
 0.844
ENSCHAP00000046742
annotation not available
   
 0.844
fancl
FA complementation group L.
    
 0.836
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.