STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000040213SHANK-associated RH domain interacting protein. (402 aa)    
Predicted Functional Partners:
rbck1
RANBP2-type and C3HC4-type zinc finger containing 1.
   
0.998
ENSCHAP00000022007
Si:dkey-181m9.8.
    
 0.990
LOC105900647
E3 ubiquitin-protein ligase RNF31-like.
    
 0.988
ENSCHAP00000023227
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.988
ENSCHAP00000051128
annotation not available
    
 0.988
ENSCHAP00000006611
annotation not available
    
 0.935
ENSCHAP00000047949
OTU deubiquitinase with linear linkage specificity b.
    
 0.935
ENSCHAP00000057132
annotation not available
    
 0.935
ENSCHAP00000015917
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.919
ENSCHAP00000049451
Spermatogenesis associated 2.
    
 0.902
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.