STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntpcrNucleoside-triphosphatase, cancer-related. (195 aa)    
Predicted Functional Partners:
ak8
Adenylate kinase 8.
     
 0.896
LOC105894955
Nucleoside diphosphate kinase, mitochondrial-like.
    
 0.888
nme5
NME/NM23 family member 5.
    
 0.888
ENSCHAP00000021960
NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2.
    
 0.888
nme6
NME/NM23 nucleoside diphosphate kinase 6.
    
 0.888
nme3
NME/NM23 nucleoside diphosphate kinase 3.
    
 0.888
ENSCHAP00000046344
NME/NM23 nucleoside diphosphate kinase 2a.
    
 0.888
ppil6
Peptidylprolyl isomerase like 6.
     
 0.876
entpd8
Ectonucleoside triphosphate diphosphohydrolase 8.
     
 0.867
entpd3
Ectonucleoside triphosphate diphosphohydrolase 3.
     
 0.867
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.