STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000040260Glomulin, FKBP associated protein a. (579 aa)    
Predicted Functional Partners:
nat10
N-acetyltransferase 10.
   
 0.997
ENSCHAP00000050426
HEAT repeat containing 1.
   
 0.997
ENSCHAP00000051587
WD repeat domain 36.
   
 0.997
pdcd11
Programmed cell death 11.
   
 0.996
wdr75
WD repeat domain 75.
   
 0.996
LOC105902840
Periodic tryptophan protein 2 homolog.
   
 0.996
bms1
BMS1 ribosome biogenesis factor.
   
 0.996
wdr3
WD repeat domain 3.
   
 0.995
ENSCHAP00000018854
NOP14 nucleolar protein homolog (yeast).
   
 0.995
tbl3
Transducin beta like 3.
   
 0.995
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.