STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000040544Solute carrier organic anion transporter family, member 1D1. (675 aa)    
Predicted Functional Partners:
ENSCHAP00000009161
annotation not available
    
  0.599
CATSPER2
Cation channel sperm associated 2.
    
  0.599
ENSCHAP00000036272
annotation not available
    
  0.599
ENSCHAP00000054234
annotation not available
    
  0.599
synj2bp
Synaptojanin 2 binding protein.
    
  0.454
ENSCHAP00000051342
annotation not available
    
  0.454
SLC16A2
Solute carrier family 16 member 2.
   
 
 0.453
slc16a10
Solute carrier family 16 member 10.
   
 
 0.453
ENSCHAP00000057391
annotation not available
   
 
 0.453
ENSCHAP00000047140
annotation not available
   
 
 0.435
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.