STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000040591SET and MYND domain containing 1b. (495 aa)    
Predicted Functional Partners:
CDYL2
Chromodomain Y like 2.
   
 0.834
ENSCHAP00000059225
Chromodomain protein, Y-like.
   
 0.834
ENSCHAP00000004205
DOT1-like histone H3K79 methyltransferase.
   
 0.789
ENSCHAP00000039357
Tumor protein p53.
   
 0.786
ENSCHAP00000039408
Tumor protein p53.
   
 0.786
ENSCHAP00000042143
annotation not available
   
 0.786
ENSCHAP00000034369
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.783
ENSCHAP00000004284
Retinoblastoma binding protein 5.
    
 0.782
ENSCHAP00000007184
Lysine (K)-specific demethylase 6B, b.
    
 0.781
ENSCHAP00000032575
Lysine (K)-specific demethylase 6B, a.
    
 0.781
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.