STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000040807Protein tyrosine phosphatase receptor type Sa. (1934 aa)    
Predicted Functional Partners:
ENSCHAP00000050446
annotation not available
    
 0.873
ENSCHAP00000006728
Neurotrophic tyrosine kinase, receptor, type 3b.
   
 0.838
LOC105892129
NT-3 growth factor receptor-like.
   
 0.838
SLITRK1
SLIT and NTRK like family member 1.
    
 0.828
slitrk2
SLIT and NTRK like family member 2.
    
 0.816
ENSCHAP00000013944
annotation not available
   
 0.814
ENSCHAP00000057226
Interleukin 1 receptor accessory protein-like 1b.
   
 0.814
ENSCHAP00000003873
Neurotrophic tyrosine kinase, receptor, type 1.
    
 0.785
ENSCHAP00000052468
Neurotrophic tyrosine kinase, receptor, type 2b.
    
 0.785
ENSCHAP00000054374
Neurotrophic tyrosine kinase, receptor, type 2a.
    
 0.785
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.