STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MOCOSMolybdenum cofactor sulfurase. (850 aa)    
Predicted Functional Partners:
iscu
Iron-sulfur cluster assembly enzyme.
  
 0.999
shmt2
Serine hydroxymethyltransferase 2.
    
 0.937
ENSCHAP00000037260
NFS1 cysteine desulfurase.
    
 0.937
ENSCHAP00000045529
Selenocysteine lyase.
    
 0.937
ENSCHAP00000013324
Gephyrin a.
  
 
 0.934
ENSCHAP00000022847
Gephyrin b.
  
 
 0.933
ENSCHAP00000026569
Selenophosphate synthetase 2.
    
 0.886
sephs1
Selenophosphate synthetase 1.
    
 0.886
LOC105909981
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial-like.
    
 0.884
ENSCHAP00000062817
NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae).
    
 0.884
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.