STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000041146Immunoglobulin superfamily, DCC subclass, member 3. (778 aa)    
Predicted Functional Partners:
ENSCHAP00000002698
HESX homeobox 1.
    
  0.985
ENSCHAP00000044126
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
  0.985
ENSCHAP00000055914
Netrin g1a.
    
 0.801
ENSCHAP00000000429
Netrin g2a.
    
 0.794
ENSCHAP00000012913
Netrin 2.
    
 0.794
LOC105898875
Netrin-1-like.
    
 0.794
ENSCHAP00000037175
Netrin 1a.
    
 0.794
ENSCHAP00000057776
annotation not available
    
 0.794
ENSCHAP00000057801
Netrin 5.
    
 0.794
ENSCHAP00000005718
annotation not available
   
 0.753
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.