STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000041171Methyltransferase like 11B. (283 aa)    
Predicted Functional Partners:
rps17
Ribosomal protein S17.
   
 
 0.781
ENSCHAP00000038357
Monoglyceride lipase.
     
 0.723
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
     
 0.708
ENSCHAP00000050475
Si:dkey-10o6.2.
     
 0.707
mrto4
MRT4 homolog, ribosome maturation factor.
   
    0.704
asmtl
Acetylserotonin O-methyltransferase like.
     
 0.695
prdx6
Peroxiredoxin 6.
   
 
  0.615
PRDX6
Peroxiredoxin 6.
   
 
  0.615
ENSCHAP00000044425
Tissue specific transplantation antigen P35B.
   
 0.594
ENSCHAP00000026229
Myocardin related transcription factor Ab.
     
 0.589
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.