STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000041189N-ethylmaleimide-sensitive factor b. (774 aa)    
Predicted Functional Partners:
ENSCHAP00000022879
UBX domain protein 7.
   
 0.996
ENSCHAP00000024505
Sec1 family domain containing 1.
   
 0.968
LOC105899537
Beta-soluble NSF attachment protein-like.
   
 0.941
ENSCHAP00000014522
N-ethylmaleimide-sensitive factor attachment protein, beta a.
   
 0.941
ENSCHAP00000028044
N-ethylmaleimide-sensitive factor attachment protein, alpha a.
   
 0.940
ENSCHAP00000050827
N-ethylmaleimide-sensitive factor attachment protein, alpha b.
   
 0.940
LOC105907026
Gamma-soluble NSF attachment protein-like.
   
 0.912
LOC105890170
Gamma-soluble NSF attachment protein-like.
   
 0.912
vamp3
Vesicle associated membrane protein 3.
   
 0.908
bet1
Bet1 golgi vesicular membrane trafficking protein.
    
 0.899
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.