STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000041292Follistatin-like 5. (857 aa)    
Predicted Functional Partners:
ENSCHAP00000016366
Carbonic anhydrase XVI b.
   
 0.777
ENSCHAP00000016346
Protein tyrosine phosphatase receptor type Ga.
   
 0.776
ENSCHAP00000049053
Protein tyrosine phosphatase receptor type Z1a.
   
 0.776
ENSCHAP00000000346
annotation not available
    
 0.774
ENSCHAP00000026782
Contactin associated protein like 3.
   
 0.533
LOC105907011
Contactin-associated protein-like 2.
   
 0.533
ENSCHAP00000034102
Glycophorin C (Gerbich blood group).
   
 0.533
cntnap1
Contactin associated protein 1.
   
 0.533
ENSCHAP00000036657
annotation not available
   
 0.533
ENSCHAP00000039458
Contactin associated protein-like 5a.
   
 0.533
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.