STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000041304annotation not available (558 aa)    
Predicted Functional Partners:
ENSCHAP00000005364
annotation not available
    
 0.998
ENSCHAP00000057469
TERF1 (TRF1)-interacting nuclear factor 2.
    
 0.998
ENSCHAP00000002451
annotation not available
    
 0.997
ENSCHAP00000044281
Protection of telomeres 1 homolog.
    
 0.994
dclre1b
DNA cross-link repair 1B.
    
 0.978
ENSCHAP00000017581
annotation not available
    
 0.962
ENSCHAP00000026628
annotation not available
    
 
 0.955
ENSCHAP00000026655
annotation not available
    
 
 0.955
ENSCHAP00000038167
annotation not available
    
 0.946
ctc1
CST telomere replication complex component 1.
     
 0.943
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.