STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000041397Docking protein 7. (773 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.943
ENSCHAP00000036352
Mitochondrial calcium uptake 1.
   
 0.656
ENSCHAP00000006977
Mitochondrial calcium uptake 2.
   
 0.639
vps28
VPS28 subunit of ESCRT-I.
    
 0.616
ENSCHAP00000012575
RAB4B, member RAS oncogene family.
    
 0.584
ENSCHAP00000050697
RAB4a, member RAS oncogene family.
    
 0.584
ENSCHAP00000019358
annotation not available
     
 0.577
ENSCHAP00000024781
Single-pass membrane protein with aspartate-rich tail 1b.
     
 0.577
PHB2
Prohibitin 2.
    
  0.559
ENSCHAP00000044331
Receptor-associated protein of the synapse, 43kD.
      
 0.549
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.