STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000041452G protein-coupled receptor 160. (280 aa)    
Predicted Functional Partners:
ENSCHAP00000040369
Sterile alpha motif domain containing 7.
      
 0.531
ENSCHAP00000038197
BCL2 interacting protein like.
      
 0.530
gpr142
G protein-coupled receptor 142.
      
 0.521
ENSCHAP00000030028
Otospiralin.
      
 0.519
ENSCHAP00000062014
Kelch-like family member 8.
      
 0.504
ENSCHAP00000026790
annotation not available
      
 0.436
ENSCHAP00000030013
COP9 signalosome subunit 9.
      
 0.424
ENSCHAP00000054076
Valosin containing protein (p97)/p47 complex interacting protein 1.
      
 0.414
ENSCHAP00000040412
annotation not available
      
 0.410
ENSCHAP00000040426
SEC62 homolog, preprotein translocation factor.
      
 0.410
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.