STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000041563Immunoglobulin superfamily, member 9a. (1673 aa)    
Predicted Functional Partners:
ENSCHAP00000034081
Protein tyrosine kinase 7a.
    
 
0.517
PTK7
Protein tyrosine kinase 7 (inactive).
    
 
0.517
ENSCHAP00000038167
annotation not available
    
 0.489
ENSCHAP00000007365
RAD50 homolog, double strand break repair protein.
    
  0.471
HGFAC
HGF activator.
    
  0.464
ENSCHAP00000038619
annotation not available
    
  0.464
HABP2
Hyaluronan binding protein 2.
    
  0.464
ENSCHAP00000005866
CD79a molecule, immunoglobulin-associated alpha.
    
 0.455
ENSCHAP00000010559
P53-induced death domain protein 1.
    
  0.452
ENSCHAP00000014494
annotation not available
    
  0.446
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.