STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105905674SH3 domain-binding protein 4-A. (975 aa)    
Predicted Functional Partners:
LOC105906309
Ras-related GTP-binding protein A.
     
 0.654
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
     
 0.614
ENSCHAP00000028304
annotation not available
     
 0.604
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
     
 0.603
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
     
 0.601
ENSCHAP00000038950
Ribosome biogenesis regulator 1 homolog.
      
 0.518
LOC105890390
Ras-related GTP-binding protein C-like.
     
 0.514
LOC105908365
Ras-related GTP-binding protein D-like.
     
 0.514
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
     
 0.500
ENSCHAP00000034713
Zona pellucida-like domain containing 1b.
  
     0.410
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (14%) [HD]