STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD10BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3-like. (315 aa)    
Predicted Functional Partners:
ENSCHAP00000022879
UBX domain protein 7.
    
 
 0.948
ENSCHAP00000027667
Cullin 3a.
    
 0.925
rbx1
Ring-box 1.
    
 0.852
CUL1
Cullin 1.
    
 0.768
LOC105907046
Cullin-1.
    
 0.768
ENSCHAP00000001317
Kelch-like family member 24a.
     
 0.758
ubxn1
UBX domain protein 1.
    
 
 0.755
ENSCHAP00000028620
DEP domain containing 5, GATOR1 subcomplex subunit.
     
 0.743
faf1
Fas associated factor 1.
    
 
 0.733
ENSCHAP00000007290
Ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila).
    
 0.724
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.