STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gucy1b1Guanylate cyclase 1 soluble subunit beta 1. (630 aa)    
Predicted Functional Partners:
GUCY1A2
Guanylate cyclase 1 soluble subunit alpha 2.
  
0.980
ENSCHAP00000042083
Guanylate cyclase 1 soluble subunit alpha 1.
  
0.980
ENSCHAP00000001628
Protein kinase cGMP-dependent 2.
   
 0.902
ENSCHAP00000003732
annotation not available
   
 0.902
ENSCHAP00000052817
annotation not available
   
 0.902
ENSCHAP00000054661
Phosphodiesterase 3B.
   
 0.892
ENSCHAP00000040184
Phosphodiesterase 10A.
   
 0.891
ENSCHAP00000023365
Phosphodiesterase 5A, cGMP-specific, b.
   
 0.888
pde6a
Phosphodiesterase 6A.
   
 0.888
ENSCHAP00000035196
Phosphodiesterase 6C, cGMP-specific, cone, alpha prime.
   
 0.888
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.