STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traddTNFRSF1A associated via death domain. (289 aa)    
Predicted Functional Partners:
ENSCHAP00000015917
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.996
ENSCHAP00000023227
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.996
fadd
Fas associated via death domain.
   
 0.991
traf2
TNF receptor associated factor 2.
    
 0.986
ENSCHAP00000003476
Tnf receptor-associated factor 2a.
    
 0.984
birc2
Baculoviral IAP repeat containing 2.
   
 0.984
LOC105902465
TNF receptor-associated factor 2-like.
    
 0.983
ENSCHAP00000054780
Caspase 10, apoptosis-related cysteine peptidase.
    
 0.981
ENSCHAP00000003536
Baculoviral IAP repeat containing 7.
   
 0.976
ENSCHAP00000029528
annotation not available
    
 0.965
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.