STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000042577T-box transcription factor 3b. (580 aa)    
Predicted Functional Partners:
ENSCHAP00000013279
Mitogen-activated protein kinase 7.
   
  0.560
ENSCHAP00000026943
Mitogen-activated protein kinase 3.
   
  0.560
mapk1
Mitogen-activated protein kinase 1.
   
  0.560
ENSCHAP00000012173
Zgc:171775.
   
  0.532
ENSCHAP00000018892
Mitogen-activated protein kinase 11.
   
  0.532
ENSCHAP00000036980
annotation not available
   
  0.532
ENSCHAP00000038403
Mitogen-activated protein kinase 13.
   
  0.532
ENSCHAP00000045863
Mitogen-activated protein kinase 14b.
   
  0.532
ENSCHAP00000056468
Mitogen-activated protein kinase 12a.
   
  0.532
ENSCHAP00000048127
NK2 homeobox 5.
   
 
 0.527
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.