STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105898159Clupea harengus gonadotropin subunit beta-2 (LOC105898159), mRNA. (149 aa)    
Predicted Functional Partners:
ENSCHAP00000040765
Luteinizing hormone/choriogonadotropin receptor.
   
 0.957
cga
Glycoprotein hormones, alpha polypeptide.
   
 
 0.953
ENSCHAP00000007771
annotation not available
   
 0.914
nutf2
Nuclear transport factor 2.
   
 0.914
ENSCHAP00000039456
Nuclear transport factor 2, like.
   
 0.914
ENSCHAP00000048834
annotation not available
   
 0.900
ENSCHAP00000004684
Thyroid stimulating hormone receptor.
   
 0.896
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
   
 0.846
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
 0.728
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
   
 0.728
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.