STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000043503THO complex 2. (1501 aa)    
Predicted Functional Partners:
thoc3
THO complex 3.
    
 0.999
thoc1
THO complex 1.
   
 0.999
ENSCHAP00000048183
THO complex 5.
   
 0.999
thoc7
THO complex 7.
   
 0.999
LOC105904970
THO complex subunit 4-like.
   
 0.997
ENSCHAP00000057055
annotation not available
   
 0.993
wtap
WT1 associated protein.
    
 0.992
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.992
ENSCHAP00000023593
Vir like m6A methyltransferase associated.
   
 0.990
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.987
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.