ENSCHAP00000043524 protein (Clupea harengus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCHAP00000043524

annotation not available (87 aa)

Predicted Functional Partners:

ENSCHAP00000033279

0.775

ENSCHAP00000038273

0.676

ENSCHAP00000060892

0.651

ENSCHAP00000047237

0.637

ENSCHAP00000019409

0.636

ENSCHAP00000030315

0.636

rps7

0.636

utp11

0.636

ENSCHAP00000046785

0.636

ENSCHAP00000027480

0.632

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000019409	ENSCHAP00000030315	ENSCHAP00000019409	ENSCHAP00000030315	Nucleolar complex associated 4 homolog.	Ddb1 and cul4 associated factor 13.	0.999
ENSCHAP00000019409	ENSCHAP00000038273	ENSCHAP00000019409	ENSCHAP00000038273	Nucleolar complex associated 4 homolog.	UTP20 small subunit processome component.	0.999
ENSCHAP00000019409	ENSCHAP00000043524	ENSCHAP00000019409	ENSCHAP00000043524	Nucleolar complex associated 4 homolog.	annotation not available	0.636
ENSCHAP00000019409	ENSCHAP00000046785	ENSCHAP00000019409	ENSCHAP00000046785	Nucleolar complex associated 4 homolog.	FCF1 rRNA-processing protein.	0.999
ENSCHAP00000019409	ENSCHAP00000047237	ENSCHAP00000019409	ENSCHAP00000047237	Nucleolar complex associated 4 homolog.	EMG1 N1-specific pseudouridine methyltransferase.	0.999
ENSCHAP00000019409	rps7	ENSCHAP00000019409	ENSCHAP00000032914	Nucleolar complex associated 4 homolog.	Ribosomal protein S7.	0.999
ENSCHAP00000019409	utp11	ENSCHAP00000019409	ENSCHAP00000034940	Nucleolar complex associated 4 homolog.	UTP11 small subunit processome component.	0.999
ENSCHAP00000027480	ENSCHAP00000043524	ENSCHAP00000027480	ENSCHAP00000043524	Glucuronidase, beta.	annotation not available	0.632
ENSCHAP00000030315	ENSCHAP00000019409	ENSCHAP00000030315	ENSCHAP00000019409	Ddb1 and cul4 associated factor 13.	Nucleolar complex associated 4 homolog.	0.999
ENSCHAP00000030315	ENSCHAP00000038273	ENSCHAP00000030315	ENSCHAP00000038273	Ddb1 and cul4 associated factor 13.	UTP20 small subunit processome component.	0.999
ENSCHAP00000030315	ENSCHAP00000043524	ENSCHAP00000030315	ENSCHAP00000043524	Ddb1 and cul4 associated factor 13.	annotation not available	0.636
ENSCHAP00000030315	ENSCHAP00000046785	ENSCHAP00000030315	ENSCHAP00000046785	Ddb1 and cul4 associated factor 13.	FCF1 rRNA-processing protein.	0.999
ENSCHAP00000030315	ENSCHAP00000047237	ENSCHAP00000030315	ENSCHAP00000047237	Ddb1 and cul4 associated factor 13.	EMG1 N1-specific pseudouridine methyltransferase.	0.999
ENSCHAP00000030315	rps7	ENSCHAP00000030315	ENSCHAP00000032914	Ddb1 and cul4 associated factor 13.	Ribosomal protein S7.	0.999
ENSCHAP00000030315	utp11	ENSCHAP00000030315	ENSCHAP00000034940	Ddb1 and cul4 associated factor 13.	UTP11 small subunit processome component.	0.999
ENSCHAP00000033279	ENSCHAP00000043524	ENSCHAP00000033279	ENSCHAP00000043524	Cytochrome b5 reductase 4.	annotation not available	0.775
ENSCHAP00000038273	ENSCHAP00000019409	ENSCHAP00000038273	ENSCHAP00000019409	UTP20 small subunit processome component.	Nucleolar complex associated 4 homolog.	0.999
ENSCHAP00000038273	ENSCHAP00000030315	ENSCHAP00000038273	ENSCHAP00000030315	UTP20 small subunit processome component.	Ddb1 and cul4 associated factor 13.	0.999
ENSCHAP00000038273	ENSCHAP00000043524	ENSCHAP00000038273	ENSCHAP00000043524	UTP20 small subunit processome component.	annotation not available	0.676
ENSCHAP00000038273	ENSCHAP00000046785	ENSCHAP00000038273	ENSCHAP00000046785	UTP20 small subunit processome component.	FCF1 rRNA-processing protein.	0.999