STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc16Cell division cycle 16. (619 aa)    
Predicted Functional Partners:
anapc11
Anaphase promoting complex subunit 11.
    
 0.999
anapc10
Anaphase promoting complex subunit 10.
    
 0.999
anapc5
Anaphase promoting complex subunit 5.
   
 0.999
cdc23
Cell division cycle 23.
   
 0.999
cdc27
Cell division cycle 27.
    
0.999
ENSCHAP00000042014
Anaphase promoting complex subunit 1.
   
 0.999
ENSCHAP00000050861
Anaphase promoting complex subunit 4.
   
 0.999
ube2c
Ubiquitin conjugating enzyme E2 C.
   
 0.999
ENSCHAP00000059282
Anaphase promoting complex subunit 2.
    
 0.999
anapc13
Anaphase promoting complex subunit 13.
    
 0.998
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.